PhenoMeNal (Phenome and Metabolome aNalysis) is a comprehensive and standardised e-infrastructure that supports the data processing and analysis pipelines for molecular phenotype data generated by metabolomics applications.
See About us.

App Library
Application Library (service catalogue) listing open source tools currently available through the PhenoMeNal Cloud Research Environment (CRE).

Cloud Research Environment
Deploy your own Cloud Research Environment (CRE) for Metabolomics data analysis on private and public cloud providers.
PhenoMeNal Galaxy Installation
Access all our available tools through an open Galaxy workflow installation which runs on an scalable infrastructure provided by PhenoMeNal partners.
User Support
Our online training page offers tutorials on PhenoMeNal Cloud Research Environment deployment, workflow creation and tools usage.

14 participants across the UK and Europe.
User documentation and developer resources.
PhenoMeNal GitHub Repos.

Contact Us
For feedback and questions, email us or use our Online Feedback Form.

Latest News

More news…


Interested in metabolic pathways and fingerprinting? Join Fabien Jourdan's webinar and find out how networks are built and used to provide biochemical insight on metabolic fingerprints. #metabolomics #H2020 @EBItraining @MetExplore

Attending the 2018 Galaxy Community and #bioinformatics #opensource Conference?

Check out @PhnmlH2020 consortium member @Phil_at_OeRC present the latest developments from @isatools on 28th June @ 15:00

@galaxyproject @MetaboLights #metabolomics #GCCBOSC

Load More...

Latest News

PhenoMeNal @ Metabolomics Conference 2018

Registered for Metabolomics 2018?  Here's a guide to what we are up to in Seattle during the 14th International Conference of the Metabolomics Society: Metabolomics Data Analysis with XCMS and Galaxy, Workshop, Sunday, June 24, 12:00pm - 2:00pm Metabolite profiling and annotation with interoperable and scalable microservices, Steffen Neumann, Parallel Session: 3. Big Data: Databases and Cloud…

Metabolomics data in the context of metabolic networks: closing the loop in the workflow

Date: Friday 6 July 2018, 10:00 -  11:00 (GMT) Abstract: Metabolomics datasets are the outcome of biochemical events ruled by enzymatic reactions. All these reactions, and related substrates and products, can be gathered in a single object called a metabolic network or in a list of metabolic pathways. In this webinar, Fabien Jourdan, INRA,  will first present how pathways can be…

Metabolomics data analysis in the Cloud: Live Online Training

Date: Wednesday 6 - Friday 8 June 2018. The PhenoMeNal consortium is pleased to announce a Live Online Training, via a series of live webinars, in which participants will become familiar with the open-source tools and workflows in the PhenoMeNal infrastructure. This event will include live webinars with time to do supported, self-directed exercises using the resources introduced during the webinars. Each…