Author Archives : Namrata

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PhenoMeNal: An online portal for metabolomics
The PhenoMeNal release team is happy to announce its 2018.08 release “Dalcotidine”! The release focuses on stability, introduction of new tools and workflows and updates to the PhenoMeNal Cloud Research Portal user interface in response to the feedback we have received in our usability tests. A summary of the notable new features in 2018.08 are:…
Date: Tuesday 17 July 2018, 11:00 -  12:00 (BST) Abstract: This webinar will show how the interpretation of metabolomics data can be boosted by deploying systems biology approaches. Systems biology-enhanced analysis of data can provide insights into the molecular mechanisms that originated the observed metabolic profiles, enhancing the impact of metabolomics studies. In this webinar we provide an overview of system…
PhenoMeNal VREs are now successfully deployed on EGI Federated Cloud resources (Cloud provider IN2P3-IRES). The achievement was a joint effort between the  EGI Federated Cloud and the PhenoMeNal consortium. To find out more read the article in the latest issue of the EGI newsletter.
Registered for Metabolomics 2018?  Here's a guide to what we are up to in Seattle during the 14th International Conference of the Metabolomics Society: Metabolomics Data Analysis with XCMS and Galaxy, Workshop, Sunday, June 24, 12:00pm - 2:00pm Metabolite profiling and annotation with interoperable and scalable microservices, Steffen Neumann, Parallel Session: 3. Big Data: Databases and Cloud…
Date: Friday 6 July 2018, 10:00 -  11:00 (BST) Abstract: Metabolomics datasets are the outcome of biochemical events ruled by enzymatic reactions. All these reactions, and related substrates and products, can be gathered in a single object called a metabolic network or in a list of metabolic pathways. In this webinar, Fabien Jourdan, INRA,  will first present how pathways can be…
Date: Wednesday 6 - Friday 8 June 2018. The PhenoMeNal consortium is pleased to announce a Live Online Training, via a series of live webinars, in which participants will become familiar with the open-source tools and workflows in the PhenoMeNal infrastructure. This event will include live webinars with time to do supported, self-directed exercises using the resources introduced during the webinars. Each…
Date: Thursday 31 May 2018, 15:00 -  16:00 (GMT) Abstract: In this webinar, Luca Pireddu from Centre for Advanced Studies, Research and Development in Sardinia will give a tour of PhenoMeNal portal including step-by-step guidance on how to deploy your own private PhenoMeNal instance on cloud computing resources. You'll learn how to manage your deployment and access the services it provides.  Finally,…
Date: Wednesday 18 April 2018, 16:00 -  17:00 GMT Abstract: Statistical analysis offers powerful approaches to mine complex and high-dimension datasets, find significant features, and build prediction models with high-prediction performance. Due to the high number of methods available, their complex mathematical background, and the potential pitfalls due to biases and overfitting, a good understanding of each step as well as…
The PhenoMeNal consortium is pleased to announce its next round of usability study of its Cloud Research Environment Portal. What is the purpose of the study? The PhenoMeNal Gateway/ Cloud Research Portal is the entry point to an array of useful metabolomics applications, all available through a user-friendly, standard scientific open-source web environments. We use open-source tools…