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The PhenoMeNal project, ELIXIR-NL and ELIXIR-DE organised a strategic workshop on the “Future of Metabolomics in ELIXIR” on 25th April in Frankfurt, Germany. The one-day workshop discussed the metabolomics resources and services available through some of the ELIXIR nodes and developed a number of ELIXIR use cases for metabolomics and their alignments with the ELIXIR platforms.…
The PhenoMeNal project and the Netherlands Metabolomics Centre are jointly organising a one day strategic workshop on "Future of Metabolomics in ELIXIR" on 25th April 2017 at Frankfurt Airport, Germany in coordination with ELIXIR-NL and ELIXIR-DE.  ELIXIR is a distributed infrastructure for life science information, bringing resources across Europe together. These resources include databases, software…
PhenoMeNal partner IPB, is hosting a two day workshop from 4th-5th April 2017, on PhenoMeNal workflows. The objective of the workshop is to showcase and improve existing workflows to achieve broader applicability, improve functionalities and add Findable Accessible Interoperable Re-usable (FAIR) information. For registration, click here.
March 10, 2017, Leiden, The Netherlands. The first Implementation Network in the European Open Science Cloud (EOSC) on Metabolomics data and services was launched by Prof. Karel Luyben, chairman of the GO FAIR initiative. GO FAIR is an early-mover-driven initiative of the European member states to start in  working on a trusted environment where public and private sector partners can…
To identify the key needs of the clinicians from metabolomics point of view, PhenoMeNal has established a working group involving clinical metabolomics practitioners and members from the consortium. This working group will contribute views and suggestions on the kind and/or specifics of computational services needed to support the transition of metabolomics from clinical research towards clinical practice including advise…
The PhenoMeNal Cloud Research Environment (CRE) portal provides an entry point to analysis tools via its open source "App Library" (Application Library) - a service catalogue of all applications (currently 24) that are currently available via Galaxy workflows through the CRE.  Each tool, available in the form of Docker container,  carries a tool description, usage instructions to be…
“A microservices architecture puts each element of functionality into a separate service” - in a presentation during the session “Emerging Methods and Practice”, at the OpenTox Euro 2016 conference, PhenoMeNal partner and work package leader, Ola Spjuth, talks about his work on microservices , Virtual research environments (VRE) and their implications including VRE’s in PhenoMeNal infrastructure. Interoperability and…
"Metabolic profiling can help us keep better track of individual health risks" - PhenoMeNal partner and work package leader, Prof Thomas Hankemeier talks about metabolomics, data privacy and sharing in his interview for the Leiden Centre of Data Science. To read more click here.
26th - 28th October 2016, Berlin. Are you participating in the 1st Conference of the European Association of Systems Medicine, Berlin? Listen to Marta Cascante from University of Barcelona, talk about metabolomic analysis and role of PhenoMeNal. For agenda and details, click here.    
PhenoMeNal has commissioned a survey to collect information on computational and storage requirements, as well as on some aspects of software usage for infrastructures managing metabolomics data. This information will help us  to produce an infrastructure that provides tools effectively useful to the community. We would be grateful if you could contribute to the survey by clicking on…