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EMBL-EBI Embassy Cloud is migrating to a new data centre and will be unavailable from the 17th to 21st February 2020. This includes the PhenoMeNal infrastructure and associated services. We apologise for any inconvenience this may cause.
Date: Tuesday 17 July 2018, 11:00 -  12:00 (BST) Abstract: This webinar will show how the interpretation of metabolomics data can be boosted by deploying systems biology approaches. Systems biology-enhanced analysis of data can provide insights into the molecular mechanisms that originated the observed metabolic profiles, enhancing the impact of metabolomics studies. In this webinar we provide an overview of system…
Date: Wednesday 6 - Friday 8 June 2018. The PhenoMeNal consortium is pleased to announce a Live Online Training, via a series of live webinars, in which participants will become familiar with the open-source tools and workflows in the PhenoMeNal infrastructure. This event will include live webinars with time to do supported, self-directed exercises using the resources introduced during the webinars. Each…
Date: Wednesday 18 April 2018, 16:00 -  17:00 GMT Abstract: Statistical analysis offers powerful approaches to mine complex and high-dimension datasets, find significant features, and build prediction models with high-prediction performance. Due to the high number of methods available, their complex mathematical background, and the potential pitfalls due to biases and overfitting, a good understanding of each step as well as…
Venue: EMBL-EBI, UK; Organiser: ICL & EMBL-EBI; Date: February 21st, 2018. PhenoMeNal is hosting a half-day workshop on Ethical, Legal and Social Implications (ELSI). The objectives of the workshop are: To understand ELSI issues governing patient data. Security of the PhenoMeNal Infrastructure including GDPR implications. The workshop will showcase lighting talks by Gauthier Chassang (INSERM), Ben Glampson (Imperial College)…
PhenoMeNal Hackathon: Public Instance Administration and Galaxy Venue: EMBL-EBI, UK; Organiser: EMBL-EBI; Date: February 19th-21st, 2018. Workshop Synopsis Bring all participants up to speed on the details of the PhenoMeNal Kubernetes-based deployment architecture and on issues arising while administering long-running PhenoMeNal deployments. Hands-on hacking sessions will focus on designing and prototype solutions to better secure, monitor and…
Tryggve 2, is  a project within The Nordic e-Infrastructure Collaboration (NeIC), consisting of the Nordic countries such as Sweden, Finland, Norway and Denmark and is hosted by the Nordic ELIXIR nodes. Tryggve develops and facilitates access to secure e-infrastructure for sensitive data, suitable for hosting large-scale cross-border biomedical research studies. With GDPR (General Data Protection Regulation)…
PhenoMeNal team is looking forward to meeting you at MetaboMeeting 2017, 11-13th December, University of Birmingham, UK.  Visit us for a hands-on session on using Cloud Research Environment (CRE) for data analysis. See schedule below:  
Date and time: Thursday 23rd  November 2017, 4:00 PM – 5:00 PM GMT Abstract: In this webinar, Dr. Steffen Neumann (Leibniz Institute of Plant Biochemistry), will introduce the MetFrag system and then focus on using it in Galaxy as part of the PhenoMeNal infrastructure.  The MetFrag workflow goes a first step to annotate molecules from compound (metabolite) databases to MS/MS (tandem mass spectrometry)…
Following the success of our recent CloudMET and Metabolomic workflows courses, we are pleased to announce one more workshop (free admission!) on 14th December at Murray Learning Centre, University of Birmingham. This workshop will feature introductory lectures  followed by practical sessions where you will be using the PhenoMeNal Gateway to run data-processing and analysis workflows. What is it?…