SuccessConsole Output

Started by upstream project "container-json2isatab" build number 39
originally caused by:
 Started by GitHub push by djcomlab
[EnvInject] - Loading node environment variables.
Building remotely on docker-packer-ansible (ansible docker) in workspace /home/ubuntu/workspace/test-container-json2isatab
[EnvInject] - Injecting environment variables from a build step.
[EnvInject] - Injecting as environment variables the properties content 
POD_PREFIX=json2isatab
TEST_CMD=run_test.sh
CONTAINER=container-registry.phenomenal-h2020.eu/phnmnl/json2isatab:latest

[EnvInject] - Variables injected successfully.
[test-container-json2isatab] $ /bin/bash -xe /tmp/jenkins5432939691313313315.sh
+ wget https://raw.githubusercontent.com/phnmnl/jenkins-scripts/develop/helm-k8s-test-runner/runWithHelm.sh
--2018-01-22 12:01:51--  https://raw.githubusercontent.com/phnmnl/jenkins-scripts/develop/helm-k8s-test-runner/runWithHelm.sh
Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 151.101.0.133, 151.101.64.133, 151.101.128.133, ...
Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|151.101.0.133|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 844 [text/plain]
Saving to: ‘runWithHelm.sh.8’

     0K                                                       100%  247M=0s

2018-01-22 12:01:51 (247 MB/s) - ‘runWithHelm.sh.8’ saved [844/844]

+ /bin/bash runWithHelm.sh
NAME:   json2isatab-gtimh
LAST DEPLOYED: Mon Jan 22 12:01:51 2018
NAMESPACE: default
STATUS: DEPLOYED

RESOURCES:
==> v1/Pod
NAME               READY  STATUS             RESTARTS  AGE
json2isatab-gtimh  0/1    ContainerCreating  0         0s


Waiting for container to be started...
fetch http://dl-cdn.alpinelinux.org/alpine/v3.6/main/x86_64/APKINDEX.tar.gz
fetch http://dl-cdn.alpinelinux.org/alpine/v3.6/community/x86_64/APKINDEX.tar.gz
v3.6.2-243-g9d95c23115 [http://dl-cdn.alpinelinux.org/alpine/v3.6/main]
v3.6.2-242-g41c32d5e5e [http://dl-cdn.alpinelinux.org/alpine/v3.6/community]
OK: 8437 distinct packages available
(1/1) Installing ca-certificates (20161130-r2)
Executing busybox-1.26.2-r9.trigger
Executing ca-certificates-20161130-r2.trigger
OK: 75 MiB in 32 packages
WARNING: ca-certificates.crt does not contain exactly one certificate or CRL: skipping
(1/3) Installing libcrypto1.0 (1.0.2n-r0)
(2/3) Installing libssl1.0 (1.0.2n-r0)
(3/3) Installing openssl (1.0.2n-r0)
Executing busybox-1.26.2-r9.trigger
Executing ca-certificates-20161130-r2.trigger
OK: 79 MiB in 35 packages
Connecting to raw.githubusercontent.com (151.101.0.133:443)
BII-S-3.json         100% |*******************************|   141k  0:00:00 ETA

Traceback (most recent call last):
  File "/usr/local/bin/run_json2tab.py", line 17, in <module>
    json_fp=in_fp, path=os.path.dirname(src_json), validate_first=False)
  File "/usr/lib/python3.6/site-packages/isatools/convert/json2isatab.py", line 52, in convert
    shutil.copy(filepath, path)
  File "/usr/lib/python3.6/shutil.py", line 241, in copy
    copyfile(src, dst, follow_symlinks=follow_symlinks)
  File "/usr/lib/python3.6/shutil.py", line 104, in copyfile
    raise SameFileError("{!r} and {!r} are the same file".format(src, dst))
shutil.SameFileError: './.dockerenv' and './.dockerenv' are the same file
All files created successfully
release "json2isatab-gtimh" deleted
Pod finished without error codes
Finished: SUCCESS